STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113419026FYVE, RhoGEF and PH domain-containing protein 2-like. (590 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.756
RHOV
Ras homolog family member V.
    
 0.528
RHOU
Ras homolog family member U.
    
 0.503
RHOG
Ras homolog family member G.
    
 0.501
LOC113432389
Ras-related C3 botulinum toxin substrate 1.
    
 0.485
ENSNSUP00000001254
annotation not available
    
 0.485
RAC2
Rac family small GTPase 2.
    
 0.485
RAC3
Rac family small GTPase 3.
    
 0.485
RHOH
Ras homolog family member H.
   
 0.478
ITSN2
Intersectin 2.
    
0.460
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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