Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP3 | CASP7 | ENSNSUP00000012838 | ENSNSUP00000003547 | Caspase 3. | Caspase 7. | 0.814 |
CASP3 | PARP1 | ENSNSUP00000012838 | ENSNSUP00000013158 | Caspase 3. | poly(ADP-ribose) polymerase 1. | 0.986 |
CASP3 | PARP2 | ENSNSUP00000012838 | ENSNSUP00000002916 | Caspase 3. | poly(ADP-ribose) polymerase 2. | 0.938 |
CASP3 | PARP3 | ENSNSUP00000012838 | ENSNSUP00000006475 | Caspase 3. | poly(ADP-ribose) polymerase family member 3. | 0.935 |
CASP7 | CASP3 | ENSNSUP00000003547 | ENSNSUP00000012838 | Caspase 7. | Caspase 3. | 0.814 |
CASP7 | PARP1 | ENSNSUP00000003547 | ENSNSUP00000013158 | Caspase 7. | poly(ADP-ribose) polymerase 1. | 0.974 |
CASP7 | PARP2 | ENSNSUP00000003547 | ENSNSUP00000002916 | Caspase 7. | poly(ADP-ribose) polymerase 2. | 0.940 |
CASP7 | PARP3 | ENSNSUP00000003547 | ENSNSUP00000006475 | Caspase 7. | poly(ADP-ribose) polymerase family member 3. | 0.937 |
CHD1L | PARP1 | ENSNSUP00000026974 | ENSNSUP00000013158 | Chromodomain helicase DNA binding protein 1 like. | poly(ADP-ribose) polymerase 1. | 0.957 |
CHD1L | PARP2 | ENSNSUP00000026974 | ENSNSUP00000002916 | Chromodomain helicase DNA binding protein 1 like. | poly(ADP-ribose) polymerase 2. | 0.861 |
CHD1L | PARP3 | ENSNSUP00000026974 | ENSNSUP00000006475 | Chromodomain helicase DNA binding protein 1 like. | poly(ADP-ribose) polymerase family member 3. | 0.826 |
CHD1L | XPC | ENSNSUP00000026974 | ENSNSUP00000002476 | Chromodomain helicase DNA binding protein 1 like. | XPC complex subunit, DNA damage recognition and repair factor. | 0.794 |
CHD1L | XRCC6 | ENSNSUP00000026974 | ENSNSUP00000004634 | Chromodomain helicase DNA binding protein 1 like. | X-ray repair cross complementing 6. | 0.771 |
HPF1 | PARG | ENSNSUP00000015297 | ENSNSUP00000017788 | Histone PARylation factor 1. | poly(ADP-ribose) glycohydrolase. | 0.539 |
HPF1 | PARP1 | ENSNSUP00000015297 | ENSNSUP00000013158 | Histone PARylation factor 1. | poly(ADP-ribose) polymerase 1. | 0.961 |
HPF1 | PARP2 | ENSNSUP00000015297 | ENSNSUP00000002916 | Histone PARylation factor 1. | poly(ADP-ribose) polymerase 2. | 0.959 |
HPF1 | PARP3 | ENSNSUP00000015297 | ENSNSUP00000006475 | Histone PARylation factor 1. | poly(ADP-ribose) polymerase family member 3. | 0.862 |
PARG | HPF1 | ENSNSUP00000017788 | ENSNSUP00000015297 | poly(ADP-ribose) glycohydrolase. | Histone PARylation factor 1. | 0.539 |
PARG | PARP1 | ENSNSUP00000017788 | ENSNSUP00000013158 | poly(ADP-ribose) glycohydrolase. | poly(ADP-ribose) polymerase 1. | 0.943 |
PARG | PARP2 | ENSNSUP00000017788 | ENSNSUP00000002916 | poly(ADP-ribose) glycohydrolase. | poly(ADP-ribose) polymerase 2. | 0.936 |
page 1 of 4