STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF2ATP binding cassette subfamily F member 2. (406 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11.
  
 0.969
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.959
RPL18
Ribosomal protein L18.
   
 0.914
RPL35
Ribosomal protein L35.
  
 
 0.914
EIF5B
Eukaryotic translation initiation factor 5B.
  
 
 0.912
MRPL33
Mitochondrial ribosomal protein L33.
  
 
 0.908
ENSNSUP00000014580
annotation not available
   
 
 0.907
RPL23A
Ribosomal protein L23a.
  
 
 0.907
RPL32
Ribosomal protein L32.
   
  0.905
RPL38
Ribosomal protein L38.
   
  0.904
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.