STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHHSonic hedgehog signaling molecule. (426 aa)    
Predicted Functional Partners:
PTCH1
Patched 1.
   
 0.970
PTCH2
Patched 2.
   
 0.952
CDON
Cell adhesion associated, oncogene regulated.
    
 0.940
BOC
BOC cell adhesion associated, oncogene regulated.
    
 0.940
VPS52
VPS52 subunit of GARP complex.
    
 0.930
ENSNSUP00000013308
annotation not available
    
 0.930
ENSNSUP00000013309
annotation not available
    
 0.930
HHIP
Hedgehog interacting protein.
    
 0.924
VPS54
VPS54 subunit of GARP complex.
    
 0.923
VPS53
VPS53 subunit of GARP complex.
    
 0.920
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.