STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (977 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.991
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.990
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.988
BPTF
Bromodomain PHD finger transcription factor.
   
 0.987
CECR2
Cat eye syndrome critical region protein 2.
    
 0.985
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.981
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.963
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.948
RSF1
Remodeling and spacing factor 1.
   
 0.907
ENSNSUP00000021842
annotation not available
   
 0.907
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.