STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNSUP00000006568annotation not available (83 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.988
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.984
XAB2
XPA binding protein 2.
    
 0.982
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
  0.981
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
    
  0.980
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
  0.980
CDC5L
Cell division cycle 5 like.
    
  0.979
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.978
SNW1
SNW domain containing 1.
   
  0.977
PRPF19
pre-mRNA-processing factor 19.
    
  0.977
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.