STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFSWAPSplicing factor SWAP. (895 aa)    
Predicted Functional Partners:
SRRM1
Serine and arginine repetitive matrix 1.
   
 
 0.708
SF3A3
Splicing factor 3a subunit 3.
      
 0.575
SF3A2
Splicing factor 3a subunit 2.
      
 0.568
CFAP20
Cilia and flagella associated protein 20.
    
   0.509
BORCS8
BLOC-1 related complex subunit 8.
      
 0.509
CRAMP1
Cramped chromatin regulator homolog 1.
   
  
 0.402
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.