STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP19Ubiquitin specific peptidase 19. (1313 aa)    
Predicted Functional Partners:
SIAH2
Siah E3 ubiquitin protein ligase 2.
    
 
 0.905
ENSNSUP00000008594
annotation not available
   
 0.851
RNF123
Ring finger protein 123.
   
 0.851
LOC113417299
Baculoviral IAP repeat-containing protein 3-like.
    
 0.791
LOC113426803
Ubiquitin.
    
 0.753
TRAF6
TNF receptor associated factor 6.
    
 0.732
PCNA
Proliferating cell nuclear antigen.
   
  0.698
ENSNSUP00000005538
annotation not available
    
 0.685
BIRC7
Baculoviral IAP repeat containing 7.
    
 0.685
ENSNSUP00000012166
annotation not available
    
 0.685
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.