STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPT4H1SPT4 homolog, DSIF elongation factor subunit. (117 aa)    
Predicted Functional Partners:
ENSNSUP00000008140
annotation not available
    
 0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
PAF1
RNA polymerase II-associated factor 1 homolog.
    
 0.998
POLR2G
RNA polymerase II subunit G.
   
 0.998
POLR2B
RNA polymerase II subunit B.
    
 0.998
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.998
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.998
CDC73
Cell division cycle 73.
    
 0.998
SSRP1
Structure specific recognition protein 1.
    
 0.998
POLR2A
RNA polymerase II subunit A.
    
 0.997
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.