STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113415136Putative methyltransferase DDB_G0268948. (272 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.719
ENSNSUP00000002943
annotation not available
   
 0.694
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
    
 0.673
BYSL
Bystin like.
   
 0.664
RPS24
Ribosomal protein S24.
  
  0.658
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.652
LTV1
LTV1 ribosome biogenesis factor.
   
 0.648
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 0.636
RPS27
Ribosomal protein S27.
    
  0.633
RPS8
Ribosomal protein S8.
    
  0.633
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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