STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSPNSarcospan. (139 aa)    
Predicted Functional Partners:
SGCG
Sarcoglycan gamma.
   
 0.917
DAG1
Dystroglycan 1.
     
 0.904
SGCZ
Sarcoglycan zeta.
   
 0.832
SGCD
Sarcoglycan delta.
   
 0.832
PGM5
Phosphoglucomutase 5.
   
 
  0.825
SGCA
Sarcoglycan alpha.
   
 
 0.816
SGCE
Sarcoglycan epsilon.
   
 
 0.816
SNTA1
Syntrophin alpha 1.
     
 0.811
ENSNSUP00000000368
annotation not available
   
 
 0.796
CAV1
Caveolin 1.
   
 
 0.796
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.