STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha 1. (2840 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta 3.
    
0.926
ITGA1
Integrin subunit alpha 1.
    
 0.906
ITGB8
Integrin subunit beta 8.
    
 0.905
ITGB1
Integrin subunit beta 1.
    
 0.904
ITGA3
Integrin subunit alpha 3.
    
 0.899
ITGA6
Integrin subunit alpha 6.
    
 0.899
ITGA2
Integrin subunit alpha 2.
    
 0.895
DAG1
Dystroglycan 1.
    
 0.893
ITGAV
Integrin subunit alpha V.
    
 0.892
LAMC2
Laminin subunit gamma 2.
    
0.880
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.