STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSBCathepsin B. (340 aa)    
Predicted Functional Partners:
PLAU
Plasminogen activator, urokinase.
     
 0.951
PLAT
Plasminogen activator, tissue type.
     
 0.940
SERPINE1
Serpin family E member 1.
    
 0.936
BCL2
BCL2 apoptosis regulator.
     
 0.914
ENSNSUP00000008592
annotation not available
   
 
 0.909
BCL2L1
BCL2 like 1.
     
 0.904
BID
BH3 interacting domain death agonist.
   
 
 0.903
CTSL
Cathepsin L.
  
0.891
CTSA
Lysosomal protective protein-like.
   
 0.880
CD74
CD74 molecule.
   
 0.878
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.