STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGPL1Sphingosine-1-phosphate lyase 1. (534 aa)    
Predicted Functional Partners:
SGPP1
Sphingosine-1-phosphate phosphatase 1.
    
 0.978
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.975
MED18
Mediator complex subunit 18.
    
 0.948
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.938
MED21
Mediator complex subunit 21.
    
  0.938
ABAT
4-aminobutyrate aminotransferase.
  
 0.938
MED23
Mediator complex subunit 23.
     
 0.937
MED10
Mediator complex subunit 10.
     
 0.937
MED14
Mediator complex subunit 14.
     
 0.937
CCNC
Cyclin C.
     
 0.933
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.