STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD4Low density lipoprotein receptor class A domain containing 4. (233 aa)    
Predicted Functional Partners:
SMAD3
SMAD family member 3.
    
 0.765
ENSNSUP00000017582
annotation not available
    
 0.765
BYSL
Bystin like.
   
 0.753
RRP12
Ribosomal RNA processing 12 homolog.
   
   0.751
FBL
Fibrillarin.
   
 
 0.743
ENSNSUP00000002943
annotation not available
   
 0.733
ENSNSUP00000009050
annotation not available
    
 0.732
RPS2
Ribosomal protein S2.
    
 0.732
ENSNSUP00000021523
annotation not available
    
 0.732
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.720
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.