STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL40Mitochondrial ribosomal protein L40. (203 aa)    
Predicted Functional Partners:
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.997
ENSNSUP00000013734
annotation not available
   
 
 0.995
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.994
MRPL16
Mitochondrial ribosomal protein L16.
   
 0.993
MRPL30
Mitochondrial ribosomal protein L30.
   
 
 0.991
MRPL32
Mitochondrial ribosomal protein L32.
   
   0.991
MRPS16
Mitochondrial ribosomal protein S16.
   
 
 0.991
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.989
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.989
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.988
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.