STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPBAP1HSPB1 associated protein 1. (502 aa)    
Predicted Functional Partners:
HSPB1
Heat shock protein family B (small) member 1.
    
 
 0.669
ENSNSUP00000000660
annotation not available
    
 0.656
NPAS3
Neuronal PAS domain protein 3.
    
 0.656
EPAS1
Endothelial PAS domain protein 1.
    
 0.656
HIF3A
Hypoxia inducible factor 3 subunit alpha.
    
 0.656
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.656
HSPB2
Heat shock protein family B (small) member 2.
    
 
 0.576
JMJD4
Jumonji domain containing 4.
      
 0.567
RIOX1
Ribosomal oxygenase 1.
      
 0.565
TRPA1
Transient receptor potential cation channel subfamily A member 1.
    
   0.539
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.