STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFXN1Sideroflexin 1. (186 aa)    
Predicted Functional Partners:
ENSNSUP00000002744
annotation not available
    
 0.629
RAB11A
RAB11A, member RAS oncogene family.
    
 0.629
LOC113428280
Ras-related protein Rab-11B.
    
 0.629
LOC113428351
Ras-related protein Rab-11B.
    
 0.629
LOC113431902
Ras-related protein Rab-25-like.
    
 0.612
LOC113430053
Rab-like protein 2A.
    
 0.565
CBFA2T3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
    0.431
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
   
    0.431
TMEM192
Transmembrane protein 192.
   
  0.413
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
    
 
 0.412
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.