STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JUPJunction plakoglobin. (740 aa)    
Predicted Functional Partners:
CDH5
Cadherin 5.
    
 0.986
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.982
CTNNBIP1
Catenin beta interacting protein 1.
    
 0.971
APC2
APC regulator of WNT signaling pathway 2.
   
 0.971
ENSNSUP00000017939
annotation not available
   
 0.971
CTNNB1
Catenin beta 1.
  
 
0.967
LOC113428029
Catenin beta-1-like.
  
 
0.966
CDH11
Cadherin 11.
    
 0.966
CDH7
Cadherin 7.
    
 0.959
CDH8
Cadherin 8.
    
 0.959
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.