STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTLDenticleless E3 ubiquitin protein ligase homolog. (707 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.999
CUL4B
Cullin 4B.
    
 0.998
RBX1
Ring-box 1.
    
 0.993
PCNA
Proliferating cell nuclear antigen.
   
 0.991
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
  
 0.976
DCAF1
DDB1 and CUL4 associated factor 1.
     
 0.969
DDB2
Damage specific DNA binding protein 2.
   
 0.968
CDT1
Chromatin licensing and DNA replication factor 1.
   
 
 0.965
CDC6
Cell division cycle 6.
   
  
 0.965
DET1
DET1 partner of COP1 E3 ubiquitin ligase.
     
 0.945
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.