STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGNL1Cingulin like 1. (1268 aa)    
Predicted Functional Partners:
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.937
TJP1
Tight junction protein 1.
    
 0.930
TRAPPC1
Trafficking protein particle complex 1.
    
 0.896
TRAPPC4
Trafficking protein particle complex 4.
    
 0.890
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.884
TRAPPC5
Trafficking protein particle complex 5.
    
 0.882
TRAPPC8
Trafficking protein particle complex 8.
    
 0.882
USO1
USO1 vesicle transport factor.
   
 0.851
LYRM4
LYR motif containing 4.
    
 0.843
ENSNSUP00000017688
annotation not available
    
 0.813
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.