STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113418851Striatin-interacting protein 1-like. (789 aa)    
Predicted Functional Partners:
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
 0.970
CTTNBP2NL
CTTNBP2 N-terminal like.
    
 0.960
PDCD10
Programmed cell death 10.
    
 0.958
LOC113412383
MOB-like protein phocein.
    
 0.934
RNF8
Ring finger protein 8.
    
 0.894
SLMAP
Sarcolemma associated protein.
    
 
 0.868
FGFR1OP2
FGFR1 oncogene partner 2.
    
 0.862
SIKE1
Suppressor of IKBKE 1.
    
 0.862
STK26
Serine/threonine kinase 26.
    
 
 0.851
TRAF3IP3
TRAF3 interacting protein 3.
    
 
 0.836
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.