STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDF2Rhomboid 5 homolog 2. (817 aa)    
Predicted Functional Partners:
ADAM17
ADAM metallopeptidase domain 17.
    
 0.699
ADAM10
ADAM metallopeptidase domain 10.
    
 0.565
METTL23
Methyltransferase like 23.
    
 
 0.557
PHB2
Prohibitin 2.
  
 0.521
PHB
Prohibitin.
  
 0.503
STOML2
Stomatin like 2.
  
 0.503
STOM
Erythrocyte band 7 integral membrane protein.
  
 0.503
ENSNSUP00000017609
annotation not available
  
 0.503
ENSNSUP00000017610
annotation not available
  
 0.503
NPHS2
NPHS2 stomatin family member, podocin.
  
 0.503
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.