STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain containing 2. (583 aa)    
Predicted Functional Partners:
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
   
    0.717
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
   
    0.717
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
    0.706
APMAP
Adipocyte plasma membrane associated protein.
  
    0.706
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.603
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.581
YRDC
yrdC N6-threonylcarbamoyltransferase domain containing.
     
 0.521
CDA
Cytidine deaminase.
     
 0.516
ENSNSUP00000000107
annotation not available
  
  
 0.512
TRMT2A
tRNA methyltransferase 2 homolog A.
  
  
 0.512
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.