WDR89 protein (Notechis scutatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

WDR89

WD repeat domain 89. (378 aa)

Predicted Functional Partners:

SDAD1

0.700

WDR43

0.698

RPF2

0.662

NOL10

0.649

ENSNSUP00000026094

0.553

DDX56

0.473

DDX54

0.457

DNLZ

0.454

CDPF1

0.454

DIMT1

0.444

Your Current Organism:

Notechis scutatus

NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDPF1	DNLZ	ENSNSUP00000008254	ENSNSUP00000001090	Cysteine rich DPF motif domain containing 1.	DNL-type zinc finger.	0.565
CDPF1	WDR89	ENSNSUP00000008254	ENSNSUP00000026344	Cysteine rich DPF motif domain containing 1.	WD repeat domain 89.	0.454
DDX54	DDX56	ENSNSUP00000028195	ENSNSUP00000028533	DEAD-box helicase 54.	DEAD-box helicase 56.	0.910
DDX54	DIMT1	ENSNSUP00000028195	ENSNSUP00000004045	DEAD-box helicase 54.	DIMT1 rRNA methyltransferase and ribosome maturation factor.	0.550
DDX54	NOL10	ENSNSUP00000028195	ENSNSUP00000028704	DEAD-box helicase 54.	Nucleolar protein 10.	0.854
DDX54	RPF2	ENSNSUP00000028195	ENSNSUP00000025773	DEAD-box helicase 54.	Ribosome production factor 2 homolog.	0.976
DDX54	SDAD1	ENSNSUP00000028195	ENSNSUP00000002882	DEAD-box helicase 54.	SDA1 domain containing 1.	0.900
DDX54	WDR43	ENSNSUP00000028195	ENSNSUP00000012579	DEAD-box helicase 54.	WD repeat domain 43.	0.940
DDX54	WDR89	ENSNSUP00000028195	ENSNSUP00000026344	DEAD-box helicase 54.	WD repeat domain 89.	0.457
DDX56	DDX54	ENSNSUP00000028533	ENSNSUP00000028195	DEAD-box helicase 56.	DEAD-box helicase 54.	0.910
DDX56	DIMT1	ENSNSUP00000028533	ENSNSUP00000004045	DEAD-box helicase 56.	DIMT1 rRNA methyltransferase and ribosome maturation factor.	0.848
DDX56	NOL10	ENSNSUP00000028533	ENSNSUP00000028704	DEAD-box helicase 56.	Nucleolar protein 10.	0.855
DDX56	RPF2	ENSNSUP00000028533	ENSNSUP00000025773	DEAD-box helicase 56.	Ribosome production factor 2 homolog.	0.998
DDX56	SDAD1	ENSNSUP00000028533	ENSNSUP00000002882	DEAD-box helicase 56.	SDA1 domain containing 1.	0.881
DDX56	WDR43	ENSNSUP00000028533	ENSNSUP00000012579	DEAD-box helicase 56.	WD repeat domain 43.	0.941
DDX56	WDR89	ENSNSUP00000028533	ENSNSUP00000026344	DEAD-box helicase 56.	WD repeat domain 89.	0.473
DIMT1	DDX54	ENSNSUP00000004045	ENSNSUP00000028195	DIMT1 rRNA methyltransferase and ribosome maturation factor.	DEAD-box helicase 54.	0.550
DIMT1	DDX56	ENSNSUP00000004045	ENSNSUP00000028533	DIMT1 rRNA methyltransferase and ribosome maturation factor.	DEAD-box helicase 56.	0.848
DIMT1	NOL10	ENSNSUP00000004045	ENSNSUP00000028704	DIMT1 rRNA methyltransferase and ribosome maturation factor.	Nucleolar protein 10.	0.749
DIMT1	RPF2	ENSNSUP00000004045	ENSNSUP00000025773	DIMT1 rRNA methyltransferase and ribosome maturation factor.	Ribosome production factor 2 homolog.	0.890