STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL39_160S ribosomal protein L39. (75 aa)    
Predicted Functional Partners:
RPL37A
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
RPL32_1
60S ribosomal protein L32.
   
 0.999
RPL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
RPP0
Ribosomal protein P0 (A0) (L10E).
   
 0.998
RPS13_2
Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.998
RPL34_1
60S ribosomal protein L34.
   
 0.998
RPS-16_3
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.998
UBI::CRP6
Ubiquitin-40S ribosomal protein S27a.
   
 0.998
RRN7
Pol I core factor CF.
   
 0.997
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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