STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_001816Hr1 domain-containing protein. (170 aa)    
Predicted Functional Partners:
PDPK1_1
3-phosphoinositide dependent protein kinase-1.
 
  
 0.879
PDPK1_2
3-phosphoinositide dependent protein kinase-1.
 
  
 0.879
CDC42_2
Rho GTPase.
   
 0.783
CDC42_1
Rho GTPase.
   
 0.783
RHO3_1
Rho GTPase.
    
 0.780
RHO1_2
GTP-binding protein Rho1.
    
 0.780
CU097_003972
Uncharacterized protein.
    
 0.780
RHO3_2
Rho GTPase.
    
 0.780
RHO1_3
GTP-binding protein Rho1.
    
 0.780
RHO4
Rho GTPase.
    
 0.780
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.