STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_001519Uncharacterized protein; Belongs to the AAA ATPase family. (196 aa)    
Predicted Functional Partners:
NPL4
Nuclear protein localization protein 4.
    
 0.932
MTR4_1
ATP-dependent RNA helicase mtr4.
   
 0.902
MTR4_2
ATP-dependent RNA helicase mtr4.
   
 0.902
CU097_014220
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
  
 0.890
CU097_015702
UBX domain-containing protein.
    
 0.887
RPT3
26S proteasome regulatory subunit 6B; Belongs to the AAA ATPase family.
 
 
 
0.885
RPT4
26S proteasome subunit rpt4; Belongs to the AAA ATPase family.
 
 
  0.880
DBP9
ATP-dependent DNA/RNA helicase.
   
 
 0.876
CU097_006678
Uncharacterized protein.
   
 0.874
CU097_000700
Uncharacterized protein.
   
 0.874
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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