STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_002013Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
CU097_007492
Uncharacterized protein.
    
  0.888
CU097_013033
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
    
 0.838
DCP2_1
mRNA-decapping enzyme subunit 2.
   
 0.758
DCP2_2
mRNA-decapping enzyme subunit 2.
   
 0.758
CU097_008400
Uncharacterized protein.
    
 0.750
EXOSC4_2
Exosome complex component RRP41.
    
  0.705
RRP4
Exosome non-catalytic core subunit rrp4.
    
 0.700
BMH1_2
14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.683
CU097_004707
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.683
BMH1_1
14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.683
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.