STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_002496Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
CU097_009477
Uncharacterized protein.
     
 0.805
TRP5
Tryptophan synthase.
    
 0.771
NUO12
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.759
CU097_006914
Lysophospholipase.
    
  0.755
ERG7_1
Lanosterol synthase (Oxidosqualene--lanosterol cyclase).
    
 0.713
ERG7_2
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.713
CU097_010832
Uncharacterized protein.
    
 0.712
CU097_013585
3'-5' exonuclease domain-containing protein.
    
 0.701
MFDX1
Adrenodoxin-like protein 1, mitochondrial.
  
 0.679
MED10
Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.669
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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