STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_001660Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
CU097_005806
Ubiquitin-like domain-containing protein.
    
 0.791
CU097_008749
Ubiquitin-like domain-containing protein.
    
 0.791
CU097_012926
Uncharacterized protein.
    
 
 0.753
TUBB3
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
  0.752
UBI::CRP6
Ubiquitin-40S ribosomal protein S27a.
    
 0.750
MRPL23
54S ribosomal protein L23, mitochondrial.
   
 
 0.745
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.734
CU097_006282
Uncharacterized protein.
   
  0.734
CU097_011623
Vezatin domain-containing protein.
   
  0.734
MRPL16
Mitochondrial ribosomal large subunit component; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.731
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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