STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_000883NodB homology domain-containing protein. (359 aa)    
Predicted Functional Partners:
CU097_009012
Uncharacterized protein.
    
 0.844
CU097_011118
Uncharacterized protein.
    
 0.844
SEC16_2
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.769
CU097_006241
Uncharacterized protein.
    
 0.730
CU097_007021
Uncharacterized protein.
    
 0.730
BRO1_2
Bck1-like resistance to osmotic shock.
    
 0.642
BRO1_1
Bck1-like resistance to osmotic shock.
    
 0.642
CU097_014158
Uncharacterized protein.
    
  0.641
CU097_015239
Uncharacterized protein.
    
  0.641
CU097_014059
Uncharacterized protein.
    
  0.641
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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