STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVP1_2Sorting nexin mvp1. (327 aa)    
Predicted Functional Partners:
MSH3_1
Mismatch repair protein msh3.
    
   0.748
MSH3_2
Mismatch repair protein msh3; Component of the post-replicative DNA mismatch repair system (MMR).
    
   0.748
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.728
VPS26B
Vacuolar protein sorting-associated protein 26B.
    
 
 0.710
VPS29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.703
CU097_015721
V-SNARE coiled-coil homology domain-containing protein.
    
 0.700
CU097_013017
Uncharacterized protein.
    
 0.674
SLA2_1
Sla2 Src like adaptor 2.
    
  0.616
AP3S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.616
SLA2_2
Sla2 Src like adaptor 2.
    
  0.616
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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