STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23IPS23-interacting protein. (185 aa)    
Predicted Functional Partners:
SEC23
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.778
SEC13_1
GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.
    
 0.718
SEC13_2
GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.
    
 0.718
SEC31_2
Protein transport protein S31.
    
 0.698
SEC31_3
Protein transport protein S31.
    
 0.698
SEC31_4
Protein transport protein S31.
    
 0.698
SEC31_1
Protein transport protein S31.
    
 0.698
SEC31_5
Protein transport protein S31.
    
 0.698
SEC22
SNAP receptor; Belongs to the synaptobrevin family.
     
 0.682
SAR1
COPII coat GTPase.
     
 0.665
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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