STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGM1_2Dynamin-like GTPase mgm1. (227 aa)    
Predicted Functional Partners:
FIS1_1
Mitochondrial membrane protein.
    
 0.866
FIS1_2
Mitochondrial membrane protein.
    
 0.866
VPS1_1
Vacuolar protein sorting-associated protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
 
  
 
 0.853
CU097_009769
SH3 domain-containing protein.
    
 
 0.846
CU097_003149
Uncharacterized protein.
    
 
 0.846
CU097_010909
Uncharacterized protein.
    
 
 0.846
CU097_005237
BAR domain-containing protein.
    
 0.843
CU097_004530
Uncharacterized protein.
   
 0.830
CU097_005136
UBA domain-containing protein.
   
 0.830
CU097_005053
UBA domain-containing protein.
   
 0.830
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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