STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBP9ATP-dependent DNA/RNA helicase. (532 aa)    
Predicted Functional Partners:
CU097_003934
CBF domain-containing protein.
   
 
 0.995
RPF2_2
rRNA-binding ribosome biosynthesis protein rpf2.
   
 
 0.991
RPF2_1
rRNA-binding ribosome biosynthesis protein rpf2.
   
 
 0.991
EBP2
rRNA-processing protein and EBNA1-binding protein ebp2.
   
 0.987
CU097_004283
Brix domain-containing protein.
   
   0.987
MAK5
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
  
 
0.985
MIS3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.978
PES1_2
mRNA-binding ribosome synthesis protein.
   
 0.974
PES1_1
mRNA-binding ribosome synthesis protein.
   
 0.974
BRX1
RNA-binding protein required for bioproteinsis of the ribosomal 60S subunit.
   
 
 0.974
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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