STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_005423Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
TFC1_1
Tau 95 subunit of transcription factor TFIIIC.
    
 
 0.850
TFC1_2
Tau 95 subunit of transcription factor TFIIIC.
    
 
 0.850
CU097_000520
TPR_REGION domain-containing protein.
    
 
 0.791
TFC4
Transcription factor TFIIIC subunit tfc4.
    
 
 0.791
GTF3C3
General transcription factor IIIC, polypeptide 3.
    
 
 0.791
CU097_002400
Uncharacterized protein.
    
 
 0.571
CU097_004135
Uncharacterized protein.
    
 
 0.571
CU097_010308
Uncharacterized protein.
    
 
 0.571
CU097_015131
Uncharacterized protein.
    
 
 0.571
CAPN7_1
Calpain 7; Belongs to the peptidase C2 family.
    
   0.414
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.