STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_005925Hist_deacetyl domain-containing protein. (144 aa)    
Predicted Functional Partners:
HTA1
Histone H2A; Belongs to the histone H2A family.
    
 0.866
RRN7
Pol I core factor CF.
    
  0.831
HIS2AV
Histone H2A; Belongs to the histone H2A family.
   
 0.804
HTB1_1
Histone H2B; Belongs to the histone H2B family.
    
 0.796
HTB1_2
Histone H2B; Belongs to the histone H2B family.
    
 0.796
UBI::CRP6
Ubiquitin-40S ribosomal protein S27a.
    
 0.778
HHT1_2
Histone H3; Belongs to the histone H3 family.
   
 0.777
HHT1_4
Histone H3; Belongs to the histone H3 family.
   
 0.777
HAT2_1
Histone acetyltransferase type B subunit 2.
   
 0.774
HAT2_2
Histone acetyltransferase type B subunit 2.
   
 0.774
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.