CU097_006223 protein (Rhizopus azygosporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CU097_006223

Uncharacterized protein. (107 aa)

Predicted Functional Partners:

GEM1

0.878

FIS1_1

0.848

FIS1_2

0.848

CU097_009680

0.844

ATG5

0.832

POR1_1

0.824

POR1_2

0.824

CU097_006149

0.820

CU097_000382

0.812

CU097_005196

0.812

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG5	CU097_006223	A0A367JZA3	A0A367IV16	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Uncharacterized protein.	0.832
ATG5	CU097_009680	A0A367JZA3	A0A367K8C9	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Uncharacterized protein.	0.885
ATG5	FIS1_1	A0A367JZA3	A0A367JC41	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Mitochondrial membrane protein.	0.455
ATG5	FIS1_2	A0A367JZA3	A0A367JP22	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Mitochondrial membrane protein.	0.455
ATG5	POR1_1	A0A367JZA3	A0A367J201	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Porin por1.	0.827
ATG5	POR1_2	A0A367JZA3	A0A367KCN9	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	Porin por1.	0.827
CU097_000382	CU097_006223	A0A367IMW4	A0A367IV16	Uncharacterized protein.	Uncharacterized protein.	0.812
CU097_000382	FIS1_1	A0A367IMW4	A0A367JC41	Uncharacterized protein.	Mitochondrial membrane protein.	0.403
CU097_000382	FIS1_2	A0A367IMW4	A0A367JP22	Uncharacterized protein.	Mitochondrial membrane protein.	0.403
CU097_000382	POR1_1	A0A367IMW4	A0A367J201	Uncharacterized protein.	Porin por1.	0.777
CU097_000382	POR1_2	A0A367IMW4	A0A367KCN9	Uncharacterized protein.	Porin por1.	0.777
CU097_005196	CU097_006223	A0A367JF56	A0A367IV16	EF-hand domain-containing protein.	Uncharacterized protein.	0.812
CU097_005196	FIS1_1	A0A367JF56	A0A367JC41	EF-hand domain-containing protein.	Mitochondrial membrane protein.	0.403
CU097_005196	FIS1_2	A0A367JF56	A0A367JP22	EF-hand domain-containing protein.	Mitochondrial membrane protein.	0.403
CU097_005196	POR1_1	A0A367JF56	A0A367J201	EF-hand domain-containing protein.	Porin por1.	0.777
CU097_005196	POR1_2	A0A367JF56	A0A367KCN9	EF-hand domain-containing protein.	Porin por1.	0.777
CU097_006149	CU097_006223	A0A367K536	A0A367IV16	RING-CH-type domain-containing protein.	Uncharacterized protein.	0.820
CU097_006149	FIS1_1	A0A367K536	A0A367JC41	RING-CH-type domain-containing protein.	Mitochondrial membrane protein.	0.461
CU097_006149	FIS1_2	A0A367K536	A0A367JP22	RING-CH-type domain-containing protein.	Mitochondrial membrane protein.	0.461
CU097_006223	ATG5	A0A367IV16	A0A367JZA3	Uncharacterized protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.832