STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_003819t-SNARE coiled-coil homology domain-containing protein. (222 aa)    
Predicted Functional Partners:
CU097_009500
t-SNARE coiled-coil homology domain-containing protein.
   
 0.975
CU097_013363
t-SNARE coiled-coil homology domain-containing protein.
   
 0.975
CU097_015721
V-SNARE coiled-coil homology domain-containing protein.
    
 0.974
CU097_001752
t-SNARE coiled-coil homology domain-containing protein.
    
 0.972
YKT6_1
Palmitoyltransferase; Belongs to the synaptobrevin family.
    
 0.942
YKT6_2
Palmitoyltransferase; Belongs to the synaptobrevin family.
    
 0.942
VPS51
Vacuolar protein sorting-associated protein 51.
    
 0.935
SED5
Cis-Golgi t-SNARE syntaxin.
    
 0.931
SEC22
SNAP receptor; Belongs to the synaptobrevin family.
    
 0.927
SEC17
Vesicular-fusion protein S17.
    
 0.904
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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