STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_005211Methyltransf_25 domain-containing protein. (272 aa)    
Predicted Functional Partners:
CU097_006136
Bms1-type G domain-containing protein.
   
  0.725
HHT1_2
Histone H3; Belongs to the histone H3 family.
   
 0.693
HHT1_4
Histone H3; Belongs to the histone H3 family.
   
 0.693
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
  0.663
CU097_004828
Uncharacterized protein.
   
  0.658
RPS19_1
40S ribosomal protein S19.
   
  0.648
RPS27_1
40S ribosomal protein S27.
    
  0.648
RPS27_2
40S ribosomal protein S27.
    
  0.648
MRPS5_2
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 0.646
MRPS5_1
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 0.646
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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