STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEA2_1GDP/GTP exchange factor for ARF. (882 aa)    
Predicted Functional Partners:
SEC21
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.954
ARL5A_1
ADP-ribosylation factor-like protein 5A; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
ARL5A_2
ADP-ribosylation factor-like protein 5A; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
ARF1
Arf GTPase arf1; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
CU097_013373
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.927
GEA2_2
GDP/GTP exchange factor for ARF.
 
      0.900
YPT1_1
GTP-binding protein of the rab.
    
 0.873
YPT1_2
GTP-binding protein of the rab.
    
 0.873
CU097_012296
Uncharacterized protein.
    
 0.849
CU097_013006
Uncharacterized protein.
    
 0.849
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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