STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2F3E2F transcription factor 3. (202 aa)    
Predicted Functional Partners:
TFDP3
Transcription factor Dp, member 3.
  
 0.999
CU097_001382
RRM domain-containing protein.
    
 0.947
CRK1_1
Cyclin-dependent serine/threonine protein kinase.
    
 0.869
CDC28_1
Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.869
PHO85_1
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.869
PHO85_2
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.869
CDC28_2
Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.869
CU097_002796
Chromo domain-containing protein.
   
 0.846
RPD3_2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.840
RPD3_1
Histone deacetylase.
    
 0.840
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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