Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC28_1 | CU097_002796 | A0A367IXS5 | A0A367INP7 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | Chromo domain-containing protein. | 0.664 |
CDC28_1 | E2F3 | A0A367IXS5 | A0A367IWV0 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | E2F transcription factor 3. | 0.869 |
CDC28_1 | TFDP3 | A0A367IXS5 | A0A367J649 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | Transcription factor Dp, member 3. | 0.804 |
CDC28_2 | CU097_002796 | A0A367K333 | A0A367INP7 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | Chromo domain-containing protein. | 0.664 |
CDC28_2 | E2F3 | A0A367K333 | A0A367IWV0 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | E2F transcription factor 3. | 0.869 |
CDC28_2 | TFDP3 | A0A367K333 | A0A367J649 | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | Transcription factor Dp, member 3. | 0.804 |
CRK1_1 | CU097_002796 | A0A367IX62 | A0A367INP7 | Cyclin-dependent serine/threonine protein kinase. | Chromo domain-containing protein. | 0.664 |
CRK1_1 | E2F3 | A0A367IX62 | A0A367IWV0 | Cyclin-dependent serine/threonine protein kinase. | E2F transcription factor 3. | 0.869 |
CRK1_1 | TFDP3 | A0A367IX62 | A0A367J649 | Cyclin-dependent serine/threonine protein kinase. | Transcription factor Dp, member 3. | 0.804 |
CU097_001382 | CU097_002796 | A0A367JZ31 | A0A367INP7 | RRM domain-containing protein. | Chromo domain-containing protein. | 0.882 |
CU097_001382 | E2F3 | A0A367JZ31 | A0A367IWV0 | RRM domain-containing protein. | E2F transcription factor 3. | 0.947 |
CU097_001382 | RPD3_1 | A0A367JZ31 | A0A367JFN9 | RRM domain-containing protein. | Histone deacetylase. | 0.417 |
CU097_001382 | RPD3_2 | A0A367JZ31 | A0A367J196 | RRM domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.417 |
CU097_001382 | TFDP3 | A0A367JZ31 | A0A367J649 | RRM domain-containing protein. | Transcription factor Dp, member 3. | 0.881 |
CU097_002796 | CDC28_1 | A0A367INP7 | A0A367IXS5 | Chromo domain-containing protein. | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | 0.664 |
CU097_002796 | CDC28_2 | A0A367INP7 | A0A367K333 | Chromo domain-containing protein. | Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. | 0.664 |
CU097_002796 | CRK1_1 | A0A367INP7 | A0A367IX62 | Chromo domain-containing protein. | Cyclin-dependent serine/threonine protein kinase. | 0.664 |
CU097_002796 | CU097_001382 | A0A367INP7 | A0A367JZ31 | Chromo domain-containing protein. | RRM domain-containing protein. | 0.882 |
CU097_002796 | E2F3 | A0A367INP7 | A0A367IWV0 | Chromo domain-containing protein. | E2F transcription factor 3. | 0.846 |
CU097_002796 | PHO85_1 | A0A367INP7 | A0A367IYB7 | Chromo domain-containing protein. | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | 0.664 |
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