CIAO1 protein (Rhizopus azygosporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CIAO1

Cytosolic iron-sulfur protein assembly. (329 aa)

Predicted Functional Partners:

FAM96B

0.997

MMS19

0.978

CU097_006975

0.978

CU097_001003

0.978

CU097_009135

0.967

CU097_013995

0.967

CU097_014189

0.936

CU097_013230

0.936

RAD15_1

0.907

RAD15_2

0.907

Your Current Organism:

Rhizopus azygosporus

NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIAO1	CU097_001003	A0A367IX20	A0A367JRX5	Cytosolic iron-sulfur protein assembly.	Uncharacterized protein.	0.978
CIAO1	CU097_006975	A0A367IX20	A0A367J726	Cytosolic iron-sulfur protein assembly.	Uncharacterized protein.	0.978
CIAO1	CU097_009135	A0A367IX20	A0A367J6N4	Cytosolic iron-sulfur protein assembly.	Uncharacterized protein.	0.967
CIAO1	CU097_013230	A0A367IX20	A0A367KCV4	Cytosolic iron-sulfur protein assembly.	Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.	0.936
CIAO1	CU097_013995	A0A367IX20	A0A367K6N8	Cytosolic iron-sulfur protein assembly.	Uncharacterized protein.	0.967
CIAO1	CU097_014189	A0A367IX20	A0A367K5J0	Cytosolic iron-sulfur protein assembly.	Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.	0.936
CIAO1	FAM96B	A0A367IX20	A0A367J573	Cytosolic iron-sulfur protein assembly.	Mitotic spindle-associated MMXD complex subunit MIP18.	0.997
CIAO1	MMS19	A0A367IX20	A0A367J6W1	Cytosolic iron-sulfur protein assembly.	Mms19 nucleotide excision repair.	0.978
CIAO1	RAD15_1	A0A367IX20	A0A367JNS6	Cytosolic iron-sulfur protein assembly.	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex.	0.907
CIAO1	RAD15_2	A0A367IX20	A0A367KH14	Cytosolic iron-sulfur protein assembly.	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex.	0.907
CU097_001003	CIAO1	A0A367JRX5	A0A367IX20	Uncharacterized protein.	Cytosolic iron-sulfur protein assembly.	0.978
CU097_001003	CU097_006975	A0A367JRX5	A0A367J726	Uncharacterized protein.	Uncharacterized protein.	0.423
CU097_001003	CU097_013230	A0A367JRX5	A0A367KCV4	Uncharacterized protein.	Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.	0.721
CU097_001003	CU097_014189	A0A367JRX5	A0A367K5J0	Uncharacterized protein.	Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.	0.721
CU097_001003	FAM96B	A0A367JRX5	A0A367J573	Uncharacterized protein.	Mitotic spindle-associated MMXD complex subunit MIP18.	0.971
CU097_001003	RAD15_1	A0A367JRX5	A0A367JNS6	Uncharacterized protein.	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex.	0.856
CU097_001003	RAD15_2	A0A367JRX5	A0A367KH14	Uncharacterized protein.	DNA-dependent ATPase of the nucleotide excision repair factor 4 complex.	0.856
CU097_006975	CIAO1	A0A367J726	A0A367IX20	Uncharacterized protein.	Cytosolic iron-sulfur protein assembly.	0.978
CU097_006975	CU097_001003	A0A367J726	A0A367JRX5	Uncharacterized protein.	Uncharacterized protein.	0.423
CU097_006975	CU097_013230	A0A367J726	A0A367KCV4	Uncharacterized protein.	Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.	0.721