STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_002995Uncharacterized protein. (588 aa)    
Predicted Functional Partners:
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.941
CU097_013504
Uncharacterized protein.
  
 0.919
CU097_006667
Uncharacterized protein.
  
 0.919
CU097_007373
ACT domain-containing protein.
  
 0.886
LEU1_1
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.871
LEU1_2
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.871
CU097_009823
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.868
LYS21
Homocitrate synthase lys21; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.868
CU097_014170
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.868
HIS4_1
Trifunctional histidinol dehydrogenase.
  
  
 0.866
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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