STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSK1_1Serine/threonine protein kinase, CMGC group; Belongs to the protein kinase superfamily. (469 aa)    
Predicted Functional Partners:
CU097_013195
Uncharacterized protein.
    
 0.934
CU097_012334
Uncharacterized protein.
    
 0.934
SRSF4
Serine arginine-rich splicing factor.
    
 0.912
CEF1_1
Pre-mRNA-splicing factor cef1.
    
   0.905
CEF1_2
Pre-mRNA-splicing factor cef1.
    
   0.905
CU097_000261
RRM domain-containing protein.
    
 
 0.874
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.874
CU097_005927
Uncharacterized protein.
    
 
 0.861
CU097_001532
RRM domain-containing protein.
    
 0.835
CU097_006188
Uncharacterized protein.
    
 0.782
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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