STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCB4Sphinganine kinase lcb4. (488 aa)    
Predicted Functional Partners:
CU097_002426
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.907
CU097_015879
acidPPc domain-containing protein.
   
 0.875
TSC10
3-dehydrosphinganine reductase.
     
 0.840
CU097_000922
Uncharacterized protein.
   
 0.833
CU097_009712
Uncharacterized protein.
  
 0.833
CU097_010604
Hexosyltransferase.
   
 
 0.829
CU097_013556
Neutral ceramidase.
    
 0.807
CU097_011624
Neutral ceramidase.
    
 0.807
GUT2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.803
CU097_011973
PAP2_C domain-containing protein.
     
 0.790
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.