STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC5_2Structural maintenance of chromosomes protein 5. (967 aa)    
Predicted Functional Partners:
NSE4
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.996
CU097_008459
SP-RING-type domain-containing protein.
    
 0.995
CU097_004753
MAGE domain-containing protein.
   
 0.993
NSMCE1_1
Non-structural maintenance of chromosomes element 1.
    
 0.988
NSMCE1_2
Non-structural maintenance of chromosomes element 1.
    
 0.988
SMC6_1
Structural maintenance of chromosomes protein 6.
   
0.987
SMC6_2
Structural maintenance of chromosomes protein 6.
   
0.987
RAD30_1
DNA-directed DNA polymerase eta rad30.
  
 0.981
RAD30_2
DNA-directed DNA polymerase eta rad30.
  
 0.981
MCD1
Sister chromatid cohesion protein 1.
   
 0.971
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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