STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRS1_1Glycine--tRNA ligase 1, mitochondrial. (636 aa)    
Predicted Functional Partners:
CU097_009663
tRNA-binding domain-containing protein.
  
 
 0.903
CU097_002215
tRNA-binding domain-containing protein.
  
 
 0.903
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.808
MIP1_2
DNA-directed DNA polymerase gamma mip1.
   
 
 0.793
MIP1_1
DNA-directed DNA polymerase gamma mip1.
   
 
 0.793
CDC60
Cytosolic leucyl tRNA synthetase.
  
 
 0.789
ILS1
Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.780
CU097_011170
AA_TRNA_LIGASE_II_ALA domain-containing protein.
  
 
 0.756
CU097_014712
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.740
SES1
Cytosolic seryl-tRNA synthetase.
   
  
 0.726
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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