STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_007735GATA-type domain-containing protein. (238 aa)    
Predicted Functional Partners:
HIS2AV
Histone H2A; Belongs to the histone H2A family.
    
 0.596
HHT1_2
Histone H3; Belongs to the histone H3 family.
    
 0.574
HHT1_4
Histone H3; Belongs to the histone H3 family.
    
 0.574
HTB1_1
Histone H2B; Belongs to the histone H2B family.
    
  0.532
HTB1_2
Histone H2B; Belongs to the histone H2B family.
    
  0.532
DOA4_2
Ubiquitin carboxyl-terminal hydrolase.
    
  0.527
DOA4_1
Ubiquitin-specific protease doa4.
    
  0.527
DOA4_3
Ubiquitin carboxyl-terminal hydrolase.
    
  0.527
CU097_007258
zf-C2H2_2 domain-containing protein.
    
  0.523
RMT1_1
Type I protein arginine N-methyltransferase Rmt1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.523
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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